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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015925192.1_cds_XP_016473457.1_65584
CDS Infomation

[gene=LOC107795351] [db_xref=GeneID:107795351] [protein=probable leucine-rich repeat receptor-like protein kinase At5g49770 isoform X2] [protein_id=XP_016473457.1] [location=complement(join(15823..16281,16623..16858,16942..17161,17751..17887,17982..18137,19257..19732,19874..20008,20177..20248,20657..20731,20888..20956,21052..21123,21237..21308,31167..31241,31316..31477,32302..32373,32472..32546,33171..33242,33716..33836,34471..34561))] [gbkey=CDS]
Sequence

ATGGTCCAAACAAGAAGAATCCAACTGATCTCTTGGTTGCTTATTTTTATGCAAGTTTTG
GGGCTGGATGCACTGACCAATTCTGGTGACTATGGCGTTCTGGAGTCACTTAGGGAAGAA
TGGGAGAACGTACCTCCAAATTGGAGTGGTACAGATCCTTGTGGGGATCCATGGGATGGC
ATCGAGTGCAACAATTCACGTGTTGTTACTATAAAATTATCAAGCATGAATCTGAAAGGG
GAGCTATCTGGAGACATCGAGGCCTTGTCTGAATTGCAGATACTGGATCTATCATACAAC
AAAGACTTGACAGGTTCACTCCCTCAATCAATCGGAAGTTTGAAGAGTTTATCAATTCTG
ATCCTTGTAGGTTGTAGATTTTCTGGACTGATACCGGACACAGTTGGATCCCTTAGTCAG
CTGGTTTTTCTATCTTTGAATCTTAACAACTTTGTTGGACCAATACCAGCTTCTATTGGT
AATTTATCAAAGCTATATTGGCTGGACTTAGCTGATAATAGGCTGAGTGGACCTCTTCCA
GTCTCCCATGGAAGCACACCTGGTCTGGACATGCTTGTTCATACAAAGCATTTTCACCTG
GGGAGAAATCAGCTCTCAGGTGAGATTCCAGCTCAGCTATTCAGCTCAAATATGACTCTC
AAACATTTGCTGCTTGAGAATAACCAGCTTACTGGAAAAATTCCCCCTACATTAGGACTT
GTGAAGACTCTGGAGGTGGTTCGTCTTGACAGGAATTCATTAGATGGATCGATTCCATCA
ACCCTCAATAATCTCATGCGTATGAGTGCACTCTTCTTATCAAACAATGAATTCACTGGC
CCCTTGCCTGATCTCACTGGCATGAATGCCCTCAACTACTTAGATATGAGCAATAATACA
TTTAGCTCAGCTGATTTTCCACTGTGGTTTTCAAGCTTGCAGTCATTGACGACTCTGGTA
ATGGAAAACACTCAACTTGAAGGAGAAATTCCAGCAACACTCTTCAACCTCTTTCAGTTG
CAGACAGTCATCTTGAGGGGAAACAAAATCAATGGAACCTTGGATATTGCGTCCAACTAT
GGAAGCCAATTAAAATTGATTGATTTGCAGAACAATTACATCGATTCATTTACAGAAAGA
CCTGGATATCGTTTTCAATTAATACTTATGCACAATCCAGTTTGTCAAGAAGGAGGATCA
GAAAACTATTGTGGCAACCCCCAAGAGAACTTTGGATATTCAACCCTACAAGATAATTGC
TTCAGAACTCAATGCAGTTCTGATCAAATTCCTAGCCCTACCTGTAAATGTGCCTATCCG
TACACTGGCGACCTATATTTCAGAGCTCCTTCCTTTTCTGATTTGACAAACACAAGTATT
TATGTGTCACTTCAACAGTCTATGATATCTTCTTTTAGCCAACATCAGGTGCTAGTAGAT
TCAGTTTCCTTGAGTAATCCGAAAAAGAATTCAGATGACTACCTTGTATTACACCTGCAA
GTTTTTCCATTTGGCCAAGATCGTTTCAACCGTACAGGGATTACCACAATCGGATTTGAA
CTTAGCAATCAGACTTTCAAACCCCCACCAAATTTTGGACCATTCTTTTTCATTGGTGAA
AGCTACAACCACTTTGAAGTTGGATCAAGAGGATCTCACAAGTCAATTGCTAAAGTAATT
ATCATTGGAGCAGCTGCTGGTGGTGTTATCCTTTTAGTTTTATCACTTATTATAGGAGTT
TATGCTTGCCAAAAGAAAAGAGCTACAGAAACTGCTAGAAAGAGTGATCCTTTTGCTACA
TGGGATTCAAATAAAGACAGCGGTGCTGTTCCGCAGTTAAAAGGTGTAAAATCTTTCTCA
TTTGAGGAGCTGAAAAAATACACCAATAATTTTTCAGAAATCAATTACATCGGATCTGGT
AGTTATGGAAAGGTATACAGAGGCACACTTCCAGATAGACAACTTATTGCAATTAAAAGA
GCAGAGCAAGGATCTAAGCAGGGTGCCCTTGAGTTTAAAACTGAGATTGAGATTCTCTCT
AGGTTTCATCACAAAAATGTTGTCAGCCTTTTAGGCTTTTGTTTCGGGCAAGGTGAACAG
ATGCTGGTCTATGAATATATACCAAATGGCTCCTTGAAAGAAAGTCTTTCAGGAAAGTCT
GGGATTAAGTTAGATTGGAAGAGGAGACTTCGGATAGCTCTTGGAGCAGCCAGAGGATTG
CAATATCTTCATGATCATGTTTACCCTCCTATCATCCACCGAGATATCAAATCAAATAAC
ATCTTGCTGGACGAGCACTTGAATGCCAAAGTTGCTGATTTTGGTCTCTCCAAGTCAATG
AGTGAACCAGAAAAGGGTTACGTCTCCACTCAGGTTAAAGGAACAATGGGCTACATGGAT
CCAGAGTATTACACATCACAACAATTGACTGAGAAGAGTGATGTCTATAGCTTCGGAGTT
GTGCTACTAGAGCTTATAACAGCAAGGAGTCCTATTGTGAGAGGAAAATATATTGTGAAG
GAAGTGAAGCAAGCAATAGATAAGTCTAAAGACATGTACAACATTGATGGTTTCGTTGAT
CCCACTATCCCCTCAAGCATGACACCTATAAGCTTCAGAAAGTTTGTAGATCTAGCTTTA
AGGTGCGTCGAAGAAGCAGGAGTTCATAGGCCAACAATGTATGAGGTCGTGAAAGAGATT
GAGAATATCATGGAAATGGATGGAATGAACACTTATGCTGAATCTGGATCAACTTCTGCC
AGCTGTGAAGGAACTAGCATAGCCTGTGGCCATCCTTACAGTGAAGAAAGTCTAGTTAGC
TACAGCGGGGGCACCAATTCGCAGTAA

Peptide Sequence

PEP ID

XP_016473457.1
PEP Infomation

PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770 isoform X2 [Nicotiana tabacum]
Sequence

MVQTRRIQLISWLLIFMQVLGLDALTNSGDYGVLESLREEWENVPPNWSGTDPCGDPWDG
IECNNSRVVTIKLSSMNLKGELSGDIEALSELQILDLSYNKDLTGSLPQSIGSLKSLSIL
ILVGCRFSGLIPDTVGSLSQLVFLSLNLNNFVGPIPASIGNLSKLYWLDLADNRLSGPLP
VSHGSTPGLDMLVHTKHFHLGRNQLSGEIPAQLFSSNMTLKHLLLENNQLTGKIPPTLGL
VKTLEVVRLDRNSLDGSIPSTLNNLMRMSALFLSNNEFTGPLPDLTGMNALNYLDMSNNT
FSSADFPLWFSSLQSLTTLVMENTQLEGEIPATLFNLFQLQTVILRGNKINGTLDIASNY
GSQLKLIDLQNNYIDSFTERPGYRFQLILMHNPVCQEGGSENYCGNPQENFGYSTLQDNC
FRTQCSSDQIPSPTCKCAYPYTGDLYFRAPSFSDLTNTSIYVSLQQSMISSFSQHQVLVD
SVSLSNPKKNSDDYLVLHLQVFPFGQDRFNRTGITTIGFELSNQTFKPPPNFGPFFFIGE
SYNHFEVGSRGSHKSIAKVIIIGAAAGGVILLVLSLIIGVYACQKKRATETARKSDPFAT
WDSNKDSGAVPQLKGVKSFSFEELKKYTNNFSEINYIGSGSYGKVYRGTLPDRQLIAIKR
AEQGSKQGALEFKTEIEILSRFHHKNVVSLLGFCFGQGEQMLVYEYIPNGSLKESLSGKS
GIKLDWKRRLRIALGAARGLQYLHDHVYPPIIHRDIKSNNILLDEHLNAKVADFGLSKSM
SEPEKGYVSTQVKGTMGYMDPEYYTSQQLTEKSDVYSFGVVLLELITARSPIVRGKYIVK
EVKQAIDKSKDMYNIDGFVDPTIPSSMTPISFRKFVDLALRCVEEAGVHRPTMYEVVKEI
ENIMEMDGMNTYAESGSTSASCEGTSIACGHPYSEESLVSYSGGTNSQ

Transcript Sequence

Gene sequence data has not been registered.